treewide: Run refresh on all packages

The crude loop I wrote to come up with this changeset:

  find -L package/feeds/packages/ -name patches | \
  sed 's/patches$/refresh/' | sort | xargs make

Signed-off-by: Ilya Lipnitskiy <ilya.lipnitskiy@gmail.com>

utils/mariadb/patches/100-fix_hostname.patch

@@ -1,6 +1,6 @@
 --- a/scripts/mysql_install_db.sh
 +++ b/scripts/mysql_install_db.sh
-@@ -419,7 +419,7 @@ fi
+@@ -418,7 +418,7 @@ fi
  
  
  # Try to determine the hostname

utils/mariadb/patches/130-c11_atomics.patch

@@ -9,7 +9,7 @@ Date:   Fri Dec 21 19:14:04 2018 +0200
 
 --- a/configure.cmake
 +++ b/configure.cmake
-@@ -866,7 +866,25 @@ int main()
+@@ -863,7 +863,25 @@ int main()
    long long int *ptr= &var;
    return (int)__atomic_load_n(ptr, __ATOMIC_SEQ_CST);
  }"
@@ -38,8 +38,8 @@ Date:   Fri Dec 21 19:14:04 2018 +0200
    SET(HAVE_valgrind 1)
 --- a/mysys/CMakeLists.txt
 +++ b/mysys/CMakeLists.txt
-@@ -79,6 +79,10 @@ TARGET_LINK_LIBRARIES(mysys dbug strings
-  ${LIBNSL} ${LIBM} ${LIBRT} ${LIBDL} ${LIBSOCKET} ${LIBEXECINFO} ${CRC32_LIBRARY})
+@@ -78,6 +78,10 @@ TARGET_LINK_LIBRARIES(mysys dbug strings
+  ${LIBNSL} ${LIBM} ${LIBRT} ${CMAKE_DL_LIBS} ${LIBSOCKET} ${LIBEXECINFO} ${CRC32_LIBRARY})
  DTRACE_INSTRUMENT(mysys)
  
 +IF (HAVE_GCC_C11_ATOMICS_WITH_LIBATOMIC)
@@ -51,7 +51,7 @@ Date:   Fri Dec 21 19:14:04 2018 +0200
  ENDIF(HAVE_BFD_H)
 --- a/sql/CMakeLists.txt
 +++ b/sql/CMakeLists.txt
-@@ -190,6 +190,10 @@ ELSE()
+@@ -191,6 +191,10 @@ ELSE()
    SET(MYSQLD_SOURCE main.cc ${DTRACE_PROBES_ALL})
  ENDIF()
  

utils/mariadb/patches/170-ppc-remove-glibc-dep.patch

@@ -1,7 +1,5 @@
-Index: mariadb-10.4.17/include/my_cpu.h
-===================================================================
---- mariadb-10.4.17.orig/include/my_cpu.h
-+++ mariadb-10.4.17/include/my_cpu.h
+--- a/include/my_cpu.h
++++ b/include/my_cpu.h
 @@ -24,17 +24,16 @@
  */
  
@@ -34,10 +32,8 @@ Index: mariadb-10.4.17/include/my_cpu.h
  #elif defined __GNUC__ && (defined __arm__ || defined __aarch64__)
    /* Mainly, prevent the compiler from optimizing away delay loops */
    __asm__ __volatile__ ("":::"memory");
-Index: mariadb-10.4.17/storage/tokudb/PerconaFT/portability/toku_time.h
-===================================================================
---- mariadb-10.4.17.orig/storage/tokudb/PerconaFT/portability/toku_time.h
-+++ mariadb-10.4.17/storage/tokudb/PerconaFT/portability/toku_time.h
+--- a/storage/tokudb/PerconaFT/portability/toku_time.h
++++ b/storage/tokudb/PerconaFT/portability/toku_time.h
 @@ -124,7 +124,7 @@ static inline tokutime_t toku_time_now(v
      __asm __volatile__ ("mrs %[rt], cntvct_el0" : [rt] "=r" (result));
      return result;

utils/mariadb/patches/180-relax-mysql_install-db-wrt-pam-tool.patch

@@ -1,6 +1,6 @@
 --- a/scripts/mysql_install_db.sh
 +++ b/scripts/mysql_install_db.sh
-@@ -359,6 +359,14 @@ then
+@@ -358,6 +358,14 @@ then
      exit 1
    fi
    plugindir=`find_in_dirs --dir auth_pam.so $basedir/lib*/plugin $basedir/lib*/mysql/plugin $basedir/lib/*/mariadb19/plugin`
@@ -15,7 +15,7 @@
    pamtooldir=$plugindir
  # relative from where the script was run for a relocatable install
  elif test -n "$dirname0" -a -x "$rel_mysqld" -a ! "$rel_mysqld" -ef "@sbindir@/mysqld"
-@@ -478,7 +486,9 @@ do
+@@ -477,7 +485,9 @@ do
    fi
  done
  
@@ -26,7 +26,7 @@
  then
    if test -z "$srcdir" -a "$in_rpm" -eq 0
    then
-@@ -499,6 +509,10 @@ then
+@@ -498,6 +508,10 @@ then
          echo
      fi
    fi

utils/mariadb/patches/190-replace-hostname-in-mysqld_safe.patch

@@ -1,6 +1,6 @@
 --- a/scripts/mysqld_safe.sh
 +++ b/scripts/mysqld_safe.sh
-@@ -242,7 +242,7 @@ wsrep_recover_position() {
+@@ -244,7 +244,7 @@ wsrep_recover_position() {
      return 1
    fi
  
@@ -9,7 +9,7 @@
  
    local wr_options="--disable-log-error  --pid-file='$wr_pidfile'"
  
-@@ -673,7 +673,7 @@ then
+@@ -664,7 +664,7 @@ then
          * ) err_log="$DATADIR/$err_log" ;;
        esac
      else
@@ -18,7 +18,7 @@
      fi
    fi
  
-@@ -752,7 +752,7 @@ fi
+@@ -743,7 +743,7 @@ fi
  
  if test -z "$pid_file"
  then